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Fig. 4 | BMC Genomics

Fig. 4

From: Xanthomonas adaptation to common bean is associated with horizontal transfers of genes encoding TAL effectors

Fig. 4

Distance trees of repeat regions or RVD sequences of TAL effectors. TAL effectors from the X. citri pv. fuscans genetic lineages fuscans, NF2 and NF3 are indicated in red, X. phaseoli pv. phaseoli NF1 lineage in blue, X. citri pv. aurantifolii in pink and X. phaseoli pv. manihotis in purple. a Phylogenetic classification of the repeat regions of TAL effectors constructed with the DisTAL program (Pérez-Quintero et al., 2015). Analysis was performed on amino acid sequences of the repeat region (excluding RVD) of TAL effectors from X. citri pv. fuscans, X. citri pv. aurantifolii, X. phaseoli pv. phaseoli and X. phaseoli pv. manihotis, using eight TAL effectors from X. translucens pv. undulosa XT4699 as outgroups. b Neighbour Joining tree representing the distance between RVD sequences, constructed using the FuncTAL program. Analysis was performed on the RVD sequences of TAL effectors from X. citri pv. fuscans, X. citri pv. aurantifolii, X. phaseoli pv. phaseoli and X. phaseoli pv. manihotis

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BMC Genomics

ISSN: 1471-2164

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